MOMD:
Mouse Oral Microbiome Database
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MOMD Genome Explorer
Selected genome:
Gemella sp.
19428wG2_WT2a
Change genome:
Available genomes
1. Actinomyces bowdenii WMus004.1
2. Bacteroides acidifaciens 19428wH3_P2318
3. Bacteroides acidifaciens 8_33DSS_C5_S8
4. Citrobacter koseri 19428wH4_BL23
5. Dysgonomonas mossii 19428wE4_P11
6. Enterococcus gallinarum 19428wB3_C2
7. Enterococcus gallinarum ENT.1
8. Escherichia coli 19428wD4_HM13
9. Gemella palaticanis CIP106318T.1
10. Gemella sp. 19428wG2_WT2a
11. Gemella sp. GH3.1
12. Gemella sp. GL1.1
13. Granulicatella sp. 19428wC4_WM01
14. Jeotgalicoccus nanhaiensis 19428wE5_W307
15. Lactobacillus johnsonii 19428wE2_CC3
16. Lactobacillus murinus LAC.1
17. Ligilactobacillus murinus 19428wF2_HT12
18. Ligilactobacillus murinus 2_2BalbC1BO2_S2
19. Mammaliicoccus lentus 19428wC1_HT5
20. Mammaliicoccus lentus 19428wG1_AE2
21. Mammaliicoccus lentus 3_3BalbC2O2_S3
22. Mammaliicoccus sciuri 19428wE1_BL01
23. Mammaliicoccus sciuri ACT.1
24. Microbacterium paludicola 19428wA4_P1012
25. Micrococcus aloeverae 19428wE3_DK2
26. Micrococcus yunnanensis 19428wG4_IOV6
27. Muribacter muris 19428wC3_WT12
28. Muribacter muris 7_18CXCR221ANO_S7
29. Neisseria sp. 19428wB4_WF04
30. Parabacteroides goldsteinii 19428wG3_P14
31. Pasteurella sp. 19428wF3_WM03
32. Proteus mirabilis 19428wB5_irhom_Sw
33. Providencia alcalifaciens WMus003.1
34. Rothia nasimurium 19428wA5_irhom_31
35. Sanguibacter inulinus DSM100099.1
36. Shigella flexneri 19428wH2_1568
37. Staphylococcus arlettae 19428wH1_IOV5
38. Staphylococcus aureus 19428wD1_P36
39. Staphylococcus aureus 4_5BalbC4O2_S4
40. Staphylococcus aureus STF.1
41. Staphylococcus capitis GW2.1
42. Staphylococcus saprophyticus 19428wB1_WM06
43. Staphylococcus warneri 19428wF1_P912
44. Staphylococcus xylosus 19428wA1_WT6
45. Streptococcus acidominimus 19428wB2_HT4
46. Streptococcus acidominimus 6_8CXCR23O2_S6
47. Streptococcus cuniculi 19428wD2_WM131
48. Streptococcus danieliae 1_1BalbC1O2_S1
49. Streptococcus danieliae STR.1
50. Streptococcus sp. 19428wA2_WM07
51. Streptococcus sp. 19428wC2_LYSM12
52. Streptococcus sp. 19428wD3_AN2
from a total of 52 genomes
Available tools:
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PROKKA Annotation
NCBI Annotation
BLAST Against Genome
Genome Info
Taxon Description
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PROKKA Genome Annotation:
contigs: 412
bases: 1,521,208 bps
CDS: 1,390
rRNA: 10
Repeat region:
tmRNA: 1
tRNA: 55
misc RNA:
Total features: 1,456
Total number of protein coding genes annotated/found:
1,390
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Items 21 - 40
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Molecule ^
PID/GenBank ID *^
Sequences
Size (NA/AA) ^
Range
Gene Product Name
SEQF5020|JADGKU010000001.1
SEQF5020_00455
Genome Viewer
NA
AA
534/178
260631-260098
Phosphinothricin N-acetyltransferase
SEQF5020|JADGKU010000001.1
SEQF5020_00454
Genome Viewer
NA
AA
573/191
260089-259517
hypothetical protein
SEQF5020|JADGKU010000001.1
SEQF5020_00453
Genome Viewer
NA
AA
1350/450
259464-258115
hypothetical protein
SEQF5020|JADGKU010000001.1
SEQF5020_00452
Genome Viewer
NA
AA
900/300
258052-257153
hypothetical protein
SEQF5020|JADGKU010000001.1
SEQF5020_00451
Genome Viewer
NA
AA
723/241
257058-256336
hypothetical protein
SEQF5020|JADGKU010000001.1
SEQF5020_00450
Genome Viewer
NA
AA
636/212
256326-255691
hypothetical protein
SEQF5020|JADGKU010000001.1
SEQF5020_00449
Genome Viewer
NA
AA
1005/335
255670-254666
hypothetical protein
SEQF5020|JADGKU010000001.1
SEQF5020_00448
Genome Viewer
NA
AA
411/137
254656-254246
hypothetical protein
SEQF5020|JADGKU010000001.1
SEQF5020_00447
Genome Viewer
NA
AA
303/101
254241-253939
hypothetical protein
SEQF5020|JADGKU010000001.1
SEQF5020_00446
Genome Viewer
NA
AA
1305/435
253823-252519
Pyrimidine-nucleoside phosphorylase
SEQF5020|JADGKU010000001.1
SEQF5020_00445
Genome Viewer
NA
AA
663/221
252505-251843
Deoxyribose-phosphate aldolase 1
SEQF5020|JADGKU010000001.1
SEQF5020_00444
Genome Viewer
NA
AA
1332/444
251721-250390
DEAD-box ATP-dependent RNA helicase CshB
SEQF5020|JADGKU010000001.1
SEQF5020_00443
Genome Viewer
NA
AA
921/307
250360-249440
tRNA pseudouridine synthase B
SEQF5020|JADGKU010000001.1
SEQF5020_00442
Genome Viewer
NA
AA
951/317
249426-248476
Bifunctional riboflavin kinase/FMN adenylyltransferase
SEQF5020|JADGKU010000001.1
SEQF5020_00441
Genome Viewer
NA
AA
273/91
248375-248103
30S ribosomal protein S15
SEQF5020|JADGKU010000001.1
SEQF5020_00439
Genome Viewer
NA
AA
1062/354
247836-246775
hypothetical protein
SEQF5020|JADGKU010000001.1
SEQF5020_00438
Genome Viewer
NA
AA
2829/943
246720-243892
UvrABC system protein A
SEQF5020|JADGKU010000001.1
SEQF5020_00437
Genome Viewer
NA
AA
363/121
243812-243450
putative protein
SEQF5020|JADGKU010000001.1
SEQF5020_00436
Genome Viewer
NA
AA
1647/549
243438-241792
putative protein
SEQF5020|JADGKU010000001.1
SEQF5020_00435
Genome Viewer
NA
AA
546/182
241735-241190
hypothetical protein
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Items 21 - 40
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* Click GI, UID, Gene Product to go to NCBI record
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Copyright 2020 Forsyth Institute
Page last updated: July 7, 2021 08:39:35
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